Gravitational Effects on Microorganism Swarming
Computer Vision · Scientific Computing
Shanghai Jiao Tong University · Sep 2024 – Aug 2025
Advisor: Dr. Zijie Qu
Automating colony boundary segmentation for the study of microorganism swarming.
My contributions
- Trained a U-Net for colony boundary segmentation and diagnosed systematic failure modes.
- Adopted a zero-shot Segment Anything Model (SAM) pipeline for reliable automated detection, replacing a manual annotation pipeline.